Hidden Gems to Visit in Malta

05/03/2026

Many people think Malta is such a small island that you can see everything within a few days. But once you start exploring, you quickly realize that the island is full of hidden places and unique locations that many tourists never discover.

For expats living in Malta or travelers who want to experience more than the typical tourist attractions, there are plenty of secret spots waiting to be explored.

Here are some hidden gems in Malta that are definitely worth visiting.

🌊 Coral Lagoon – Mellieha

Coral Lagoon is a small and secluded natural lagoon located near Mellieha Bay on the northern coast of Malta. It sits between Mellieha Bay and Armier Bay and is only accessible by boat or by walking down a steep and rocky path.

The lagoon is famous for its crystal-clear turquoise water and unique rock formations. A natural coral reef surrounds the lagoon, making it a great spot for snorkeling and diving. Visitors often spot colorful fish and other marine life swimming around the rocks.

Because it's a bit harder to reach, Coral Lagoon remains peaceful and less crowded than many other beaches in Malta. There are no facilities available, so visitors should bring their own food, water, and sun protection. The rocks can also be slippery, so proper footwear is recommended.

For expats looking for a quiet escape from busy tourist beaches, Coral Lagoon is a perfect hidden paradise.

Coral Lagoon – Mellieha
Coral Lagoon – Mellieha

🌄 Wied il-Għasri – Gozo

Wied il-Għasri is a breathtaking narrow valley located on the northern coast of Gozo. Surrounded by high cliffs and dramatic rock formations, it leads to a small hidden inlet with incredibly clear blue water.

The valley stretches for about three kilometers and is one of the most scenic places on the island. At the end of the valley, visitors will find a small rocky beach where they can swim, relax, and snorkel.

The water here is exceptionally clear, and the area is known for its underwater caves and tunnels, making it a popular spot for divers.

Visitors can also explore several walking trails around the valley that offer spectacular views of Gozo's rugged coastline.

There are no facilities in the area, so visitors should bring water, snacks, and sun protection. During peak summer months it can become busier, so visiting early in the morning or later in the afternoon is recommended.

Wied il-Għasri – Gozo
Wied il-Għasri – Gozo

🏝 San Blas Bay – Gozo

San Blas Bay is one of the most beautiful hidden beaches in Malta and Gozo. Located near the village of Nadur on Gozo's northeast coast, this small sandy beach is surrounded by steep cliffs and untouched nature.

The golden-red sand and calm, shallow waters make it a fantastic place for swimming and snorkeling. Compared to more popular beaches, San Blas Bay feels peaceful and secluded.

However, reaching the beach requires a walk down a steep road and path from the top of the hill. The walk back up can be challenging, so visitors should wear good walking shoes and take their time.

For expats who enjoy exploring nature and discovering less crowded beaches, San Blas Bay is a true hidden treasure.

San Blas Bay – Gozo
San Blas Bay – Gozo

💀 The Skull Church – Valletta

One of Malta's most unusual and slightly eerie attractions is the Skull Church, also known as the Capuchin Catacombs in Valletta.

This underground chapel contains the skeletal remains of more than 7,000 individuals, mainly Capuchin monks and members of the Maltese nobility.

The origins of the catacombs date back to the 16th century when Capuchin friars began burying their deceased members in a small underground crypt. Over time, the crypt expanded and the monks began arranging the bones in decorative patterns throughout the chapel.

The Skull Church – Valletta
The Skull Church – Valletta

Visitors walking through the narrow corridors can see intricate displays made from skulls and bones, arranged in shapes such as crosses, hearts, and even chandeliers. There are also several well-preserved mummified bodies on display.

The Skull Church is located in the heart of Valletta and offers guided tours for those interested in this fascinating piece of Maltese history.

🕳 Ghar Dalam Cave – Malta's Prehistoric Site

Ghar Dalam Cave is a natural limestone cave located in the southeast of Malta near the village of Birżebbuġa. The cave is one of Malta's most important archaeological sites.

The name "Ghar Dalam" means "Cave of Darkness" in Maltese. The cave stretches for about 144 meters and visitors can walk through narrow passages and chambers while exploring its fascinating geological formations.

Archaeologists discovered some of the earliest evidence of human habitation in Malta here. Even more impressive are the fossils of prehistoric animals that once lived on the island.

Among the discoveries were remains of dwarf elephants, hippopotamuses, and other animals from the Pleistocene era. These animals evolved into smaller species due to the island's limited resources.

Today, Ghar Dalam offers a fascinating glimpse into Malta's ancient past and is a must-visit for history lovers.

Ghar Dalam Cave – Malta’s Prehistoric Site
Ghar Dalam Cave – Malta’s Prehistoric Site

🌍 Discover More of Malta Beyond the Tourist Spots

Malta may be small, but it is full of surprises. From hidden beaches and dramatic valleys to mysterious caves and historic underground sites, there is always something new to discover.

For expats living in Malta and travelers who want to explore beyond the typical attractions, these hidden gems offer unforgettable experiences and a deeper connection with the island. This you can do with our Hikes!

So next time you're planning a weekend adventure, skip the busy tourist hotspots and discover one of Malta's secret treasures instead.